%in%	genotype
%in%.default	genotype
%in%.genotype	genotype
%in%.haplotype	genotype
==.genotype	genotype
==.haplotype	genotype
allele	homozygote
allele.count	homozygote
allele.count.2.genotype	undocumented
allele.count.genotype	genotype
allele.names	homozygote
as.character.gene	locus
as.character.locus	locus
as.character.marker	locus
as.factor	undocumented
as.factor.allele.genotype	undocumented
as.factor.default	undocumented
as.factor.genotype	undocumented
as.genotype	genotype
as.genotype.allele.count	genotype
as.genotype.character	genotype
as.genotype.default	genotype
as.genotype.factor	genotype
as.genotype.genotype	genotype
as.genotype.haplotype	genotype
as.genotype.table	genotype
as.haplotype	genotype
carrier	homozygote
carrier.genotype	homozygote
ci.balance	ci.balance
diseq	diseq
diseq.ci	diseq
diseq.genotype	diseq
diseq.table	diseq
expectedGenotypes	expectedGenotypes
expectedHaplotypes	expectedGenotypes
gene	locus
gene<-	locus
geno.as.array	undocumented
genotype	genotype
genotypeOrder	order.genotype
genotypeOrder<-	order.genotype
getgene	locus
getlocus	locus
getmarker	locus
gregorius	gregorius
groupGenotype	groupGenotype
hap	undocumented
hapambig	undocumented
hapenum	undocumented
hapfreq	undocumented
haplotype	genotype
hapmcmc	undocumented
hapshuffle	undocumented
heterozygote	homozygote
heterozygote.genotype	genotype
homozygote	homozygote
homozygote.genotype	genotype
HWE.chisq	HWE.chisq
HWE.chisq.genotype	HWE.chisq
HWE.exact	HWE.exact
HWE.test	HWE.test
HWE.test.data.frame	HWE.test
HWE.test.genotype	HWE.test
is.gene	locus
is.genotype	genotype
is.haplotype	genotype
is.locus	locus
is.marker	locus
LD	LD
LD.data.frame	LD
LD.genotype	LD
LDplot	print.LD
LDtable	print.LD
locus	locus
locus<-	locus
makeGenotypes	makeGenotypes
makeHaplotypes	makeGenotypes
marker	locus
marker<-	locus
mknum	undocumented
mourant	undocumented
nallele	genotype
order	order.genotype
order.genotype	order.genotype
plot.genotype	plot.genotype
plot.LD.data.frame	print.LD
power.casectrl	depreciated
print.allele.count	genotype
print.allele.genotype	genotype
print.diseq	diseq
print.gene	locus
print.genotype	genotype
print.HWE.test	HWE.test
print.LD	print.LD
print.LD.data.frame	print.LD
print.locus	locus
print.marker	locus
print.summary.genotype	summary.genotype
print.summary.LD.data.frame	print.LD
shortsummary.genotype	undocumented
sort.genotype	order.genotype
summary.genotype	summary.genotype
summary.LD.data.frame	print.LD
write.marker.file	write.pop.file
write.pedigree.file	write.pop.file
write.pop.file	write.pop.file
[.genotype	genotype
[.haplotype	genotype
[<-.genotype	genotype
[<-.haplotype	genotype
